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In silico mining of expressed sequence tags (ESTs) for markers in horticultural crops (Ongoing)

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V. Radhika


C. Aswath

Lakshman Reddy, D.C.


  • In silico microsatellite development in the crops - onion, garden pea, cluster bean, carrot, watermelon, muskmelon, Brassicaceae, Arum lily and Myrtaceae.
  • Trait-specific SSR mining in tomato  for the traits - drought, nematode, Phytophthora infestans, Alternaria, tomato leaf curl, Bacterial blight and French bean (rust)
  • In silico mining of SNPs from ESTs of onion, garden pea, cluster bean, muskmelon and Brassica oleraceae
  • Identification of expressed sequences associated with abiotic stress (drought) in capsicum
  • miRNA mining in onion ESTs